Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011262.1 Corchorus capsularis cultivar CVL-1 contig11283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7743

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--264
21
3.6
21
68
20
65
23
3
11
61
1.45
170--260
47
1.9
47
100
0
182
28
4
9
57
1.51
185--259
23
3.2
23
68
17
73
25
4
9
61
1.44
185--260
24
3.2
24
68
17
77
25
3
9
61
1.43
430--521
31
2.9
31
85
9
98
10
31
40
17
1.84
451--521
31
2.2
33
90
7
112
9
30
40
18
1.83
818--853
6
6.0
6
93
0
63
47
50
0
2
1.15
917--941
6
4.2
6
100
0
50
32
0
52
16
1.44
2856--2989
16
8.4
16
83
4
173
9
17
35
36
1.83
3219--3300
42
2.0
42
90
0
128
35
4
19
40
1.73
3761--3832
16
4.5
16
76
10
67
12
23
33
30
1.92

Tables:   1

The End!