Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011263.1 Corchorus capsularis cultivar CVL-1 contig11284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32083

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
600--650
17
3.1
16
72
10
50
33
3
17
45
1.67
637--905
111
2.5
108
84
4
324
40
8
11
39
1.72
637--905
110
2.5
110
82
4
314
40
8
11
39
1.72
2875--2905
11
2.8
11
95
0
53
45
0
6
48
1.28
3249--3286
15
2.4
17
87
12
55
36
39
15
7
1.77
3953--4003
22
2.2
22
93
6
84
7
31
0
60
1.25
5096--5134
20
2.0
20
94
0
69
33
20
10
35
1.86
5630--5676
16
2.9
16
90
0
76
19
8
12
59
1.58
5955--6001
24
2.0
24
95
0
85
51
27
4
17
1.64
6622--6700
31
2.5
31
83
4
106
29
11
21
37
1.88

Tables:   1

The End!