Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011266.1 Corchorus capsularis cultivar CVL-1 contig11287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23288

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2735--2780
22
2.1
21
92
4
74
43
17
30
8
1.79
4030--4084
20
2.8
20
94
0
92
36
23
12
27
1.91
4030--4092
20
3.2
19
88
4
81
41
22
11
25
1.86
8845--8899
20
2.8
20
94
0
92
36
23
12
27
1.91
8845--8907
20
3.2
19
88
4
81
41
22
11
25
1.86
9588--9630
22
2.0
22
85
0
59
48
0
20
30
1.50
9593--9641
22
2.2
22
82
7
55
48
0
26
24
1.51
20116--20147
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!