Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011271.1 Corchorus capsularis cultivar CVL-1 contig11292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25880

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1409--1598
22
8.6
22
68
10
75
33
13
10
43
1.77
1546--1598
23
2.4
22
84
9
63
37
15
7
39
1.75
1640--1693
27
2.0
28
85
10
76
7
40
3
48
1.49
4048--4455
166
2.5
165
85
2
552
38
15
13
31
1.87
4048--4533
166
2.9
165
80
6
550
37
16
14
31
1.89
13844--13904
30
2.0
30
90
6
97
42
6
4
45
1.51
16376--16434
30
1.9
31
83
13
77
18
15
8
57
1.63
17221--17246
1
26.0
1
100
0
52
0
0
0
100
0.00

Tables:   1

The End!