Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011275.1 Corchorus capsularis cultivar CVL-1 contig11296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30284

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2264--2297
15
2.3
15
90
10
52
61
5
5
26
1.42
5059--5087
6
4.8
6
100
0
58
68
17
0
13
1.20
6441--6491
25
2.0
26
84
7
68
66
7
3
21
1.34
13126--13158
16
2.1
16
88
11
50
42
6
30
21
1.77
24005--24048
20
2.2
20
87
0
61
47
0
15
36
1.46
29626--29658
16
2.1
16
88
11
50
42
6
30
21
1.77
30248--30282
11
3.2
11
91
0
61
80
17
2
0
0.84

Tables:   1

The End!