Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011278.1 Corchorus capsularis cultivar CVL-1 contig11299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8385

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
423--502
27
3.0
27
90
0
115
41
22
18
17
1.90
728--1164
125
3.3
124
67
22
348
49
4
11
33
1.60
688--1237
275
2.0
274
98
0
1064
49
4
12
33
1.62
2045--2108
29
2.2
30
94
5
114
46
0
18
34
1.49
2098--2148
26
1.9
27
88
4
77
52
0
7
39
1.30
2228--2321
27
3.5
26
83
11
86
48
1
12
37
1.48
2589--2634
6
8.0
6
90
9
78
50
0
17
32
1.47
2587--2634
16
2.9
16
93
6
78
50
0
18
31
1.48
4625--4723
47
2.1
49
92
3
166
31
10
14
44
1.78

Tables:   1

The End!