Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001128.1 Corchorus capsularis cultivar CVL-1 contig01128, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13965

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3507--3585
34
2.4
34
91
2
124
53
3
3
39
1.37
5032--5092
20
3.1
19
68
13
59
54
6
19
19
1.66
5848--5887
18
2.2
18
86
0
53
7
30
20
42
1.79
5868--5909
22
1.9
22
90
0
66
7
23
21
47
1.75
9105--9185
40
2.0
40
97
0
153
34
16
8
40
1.79
9371--9400
14
2.1
14
93
0
51
20
30
0
50
1.49
13924--13950
6
4.5
6
100
0
54
18
0
0
81
0.69

Tables:   1

The End!