Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011283.1 Corchorus capsularis cultivar CVL-1 contig11304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31847

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3151--3185
3
11.7
3
93
0
61
62
0
2
34
1.10
3246--3348
49
2.1
49
83
7
129
36
18
19
25
1.94
3650--3681
16
2.0
16
100
0
64
31
12
31
25
1.92
5583--5624
22
1.9
22
100
0
84
21
40
23
14
1.90
9298--9350
27
2.0
27
88
0
79
47
15
3
33
1.63
10725--10879
31
4.9
31
78
5
132
36
23
22
16
1.94
10737--10891
63
2.5
63
82
1
177
36
23
22
17
1.95
10768--10891
31
4.0
31
80
2
140
33
24
23
18
1.97
11263--11287
13
1.9
13
100
0
50
88
0
12
0
0.53
11277--11318
21
2.0
22
86
9
61
59
14
9
16
1.60
18140--18651
35
14.7
35
90
3
804
40
10
16
32
1.83
18636--18662
14
1.9
14
100
0
54
40
0
29
29
1.57
22417--22464
18
2.9
16
81
9
53
18
4
60
16
1.51
24764--24804
20
2.0
21
95
4
75
51
0
14
34
1.43
24791--24823
16
2.0
17
94
5
59
42
0
12
45
1.41
26810--26870
30
2.0
30
100
0
122
32
34
19
13
1.90
28717--28746
15
2.0
15
93
0
51
40
16
13
30
1.87
30745--30795
16
3.2
16
72
5
59
33
1
7
56
1.39
30745--30806
31
2.0
31
96
0
115
29
1
9
59
1.38

Tables:   1

The End!