Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011288.1 Corchorus capsularis cultivar CVL-1 contig11309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38355

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--187
22
2.8
21
80
11
61
9
43
37
9
1.71
4501--4864
183
2.0
183
95
0
647
27
15
24
32
1.95
4922--4987
30
2.2
30
91
5
107
34
18
9
37
1.82
4934--5004
30
2.4
30
85
4
90
35
23
7
33
1.82
10763--10798
19
2.0
19
89
10
58
33
0
0
66
0.92
13601--13636
18
2.0
18
88
0
54
30
5
8
55
1.52
14731--14801
29
2.4
31
83
4
83
33
18
8
39
1.81
14872--14925
28
1.9
28
96
0
99
22
31
20
25
1.98
19986--20169
87
2.1
86
82
6
219
36
25
7
29
1.84
22975--23000
1
26.0
1
100
0
52
0
0
0
100
0.00
25250--25440
38
5.0
38
92
0
310
23
18
36
21
1.95
25439--25475
6
6.2
6
87
0
56
18
2
32
45
1.64
30225--30282
29
1.9
30
86
13
84
55
8
6
29
1.56
33452--33497
18
2.5
19
72
13
51
52
6
15
26
1.67

Tables:   1

The End!