Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011291.1 Corchorus capsularis cultivar CVL-1 contig11312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15523

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1034--1396
55
6.6
55
92
1
568
46
10
20
23
1.81
1191--1216
8
3.2
8
100
0
52
53
11
11
23
1.69
1334--1472
71
2.0
70
83
8
174
49
7
17
25
1.72
1405--1470
31
2.1
31
86
8
89
50
6
18
25
1.70
1609--1648
14
2.9
14
84
0
53
52
2
22
22
1.59
1656--1750
35
2.7
35
88
0
145
54
3
26
15
1.56
1579--1809
121
1.9
120
80
7
270
54
3
23
18
1.59
1732--1835
50
2.0
51
82
10
124
55
4
19
20
1.60
1806--2244
21
21.0
21
68
17
154
52
7
20
20
1.70
1781--1968
21
8.8
22
80
9
158
51
6
20
21
1.70
1934--2070
35
3.9
36
90
2
215
51
7
21
19
1.70
1934--2070
71
1.9
71
92
0
229
51
7
21
19
1.70
1995--2027
14
2.3
15
85
15
52
48
6
24
21
1.72
2122--2177
15
3.9
15
74
9
62
57
5
21
16
1.59

Tables:   1

The End!