Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011294.1 Corchorus capsularis cultivar CVL-1 contig11315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62315

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3604--3638
16
2.2
16
94
0
61
68
2
0
28
1.04
8702--8746
22
2.0
22
83
8
56
64
0
31
4
1.13
21354--21396
22
2.0
22
95
0
77
13
23
34
27
1.93
22053--22078
5
5.2
5
100
0
52
19
19
0
61
1.35
22170--22391
108
2.0
109
90
0
347
26
19
21
31
1.97
34940--35137
63
3.2
62
95
1
342
15
21
17
45
1.85
34940--35137
62
3.1
63
94
2
344
15
21
17
45
1.85
54631--54672
20
2.1
20
95
0
75
52
9
19
19
1.72
54662--54900
92
2.6
92
99
0
469
37
16
20
25
1.93
55187--55247
2
35.0
2
70
26
50
52
0
1
45
1.10
55181--55252
12
5.8
12
81
15
92
51
0
1
47
1.09
55187--55247
14
4.4
14
80
15
74
52
0
1
45
1.10
55568--55810
121
2.0
121
91
1
389
27
19
25
26
1.99
58288--58455
83
2.0
83
89
2
257
32
19
14
33
1.92
62033--62180
73
2.0
73
100
0
296
41
17
5
35
1.73
62281--62309
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!