Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011295.1 Corchorus capsularis cultivar CVL-1 contig11316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11111

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1162--1225
33
1.9
33
93
0
110
34
17
7
40
1.78
3496--3777
150
1.9
150
91
0
465
37
14
9
38
1.79
4550--4621
15
5.1
15
71
19
55
33
0
16
50
1.46
4526--4618
41
2.3
41
94
3
161
34
1
18
46
1.56
7046--7074
2
15.0
2
92
7
51
48
0
0
51
1.00
7591--7637
25
1.9
25
82
4
60
57
4
10
27
1.51
9929--9983
26
2.1
26
82
0
65
40
12
3
43
1.60

Tables:   1

The End!