Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011297.1 Corchorus capsularis cultivar CVL-1 contig11318, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31037

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3306--3464
84
1.9
84
85
2
221
33
11
23
31
1.90
9643--9669
2
13.5
2
100
0
54
51
0
0
48
1.00
11021--11047
12
2.2
12
100
0
54
70
7
7
14
1.32
20407--20432
9
2.9
9
100
0
52
34
0
11
53
1.37
21567--21595
15
1.9
15
100
0
58
55
0
37
6
1.27
22006--22037
12
2.4
14
90
10
50
46
3
9
40
1.52
22786--22825
2
20.0
2
100
0
80
50
0
0
50
1.00
29290--29363
33
2.2
33
80
4
87
43
6
14
35
1.72

Tables:   1

The End!