Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011299.1 Corchorus capsularis cultivar CVL-1 contig11320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12632

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--142
17
3.0
21
63
21
52
42
0
19
38
1.51
1944--1990
13
3.7
13
88
2
69
57
8
10
23
1.60
1944--1996
25
2.1
25
86
6
72
58
9
9
22
1.58
9011--9036
6
4.3
6
100
0
52
53
15
0
30
1.42
10926--11103
94
1.9
94
91
0
293
23
13
19
43
1.87
11150--11193
21
2.1
21
95
0
79
22
9
11
56
1.62
11270--11337
33
2.1
33
91
0
109
39
5
22
32
1.78
11280--11347
33
2.1
33
83
5
84
42
7
19
30
1.78

Tables:   1

The End!