Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011300.1 Corchorus capsularis cultivar CVL-1 contig11321, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28389

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9148--9177
12
2.4
13
94
5
53
80
13
0
6
0.91
10566--10903
49
6.8
50
84
6
391
23
26
17
32
1.96
10557--10903
50
6.9
50
85
4
405
22
26
17
33
1.96
10556--10950
102
4.0
99
82
7
408
22
27
17
32
1.96
11693--12077
155
2.5
153
81
5
485
40
8
13
37
1.75
19074--19103
14
2.1
14
93
0
51
20
20
3
56
1.56
19354--19479
61
2.0
61
87
4
182
39
5
13
41
1.68
19627--19782
79
2.0
79
96
0
285
25
17
14
42
1.88
22638--22706
33
2.1
33
83
0
84
40
8
18
31
1.81
23784--23812
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!