Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011301.1 Corchorus capsularis cultivar CVL-1 contig11322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36121

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1328--1390
30
2.1
29
88
8
90
52
6
4
36
1.48
6833--6944
50
2.2
50
96
0
206
27
15
7
50
1.70
8536--8560
2
12.5
2
100
0
50
52
48
0
0
1.00
16880--16927
24
2.0
24
100
0
96
25
29
12
33
1.92
29937--29961
12
2.1
12
100
0
50
48
0
8
44
1.32
30156--30204
10
5.2
9
80
11
55
42
4
2
51
1.32

Tables:   1

The End!