Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011302.1 Corchorus capsularis cultivar CVL-1 contig11323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1625

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--179
21
3.3
21
68
20
68
36
15
13
34
1.87
129--189
21
3.0
21
64
22
58
39
11
11
37
1.78
113--192
39
2.1
39
100
0
160
38
12
12
36
1.81
239--447
103
2.0
102
91
2
339
28
15
13
42
1.84
505--542
11
3.5
11
85
10
51
57
2
0
39
1.12
873--981
27
4.0
27
67
7
76
48
5
4
41
1.47
858--970
14
8.1
14
71
4
77
42
7
5
45
1.54
857--981
41
3.0
41
96
1
232
46
6
4
42
1.50
1076--1113
11
3.5
11
85
10
51
57
2
0
39
1.12

Tables:   1

The End!