Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011305.1 Corchorus capsularis cultivar CVL-1 contig11326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18531

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
556--604
6
8.3
6
86
4
73
34
16
0
48
1.46
2328--2431
56
1.9
53
94
5
181
44
10
5
39
1.63
2847--2903
2
28.5
2
78
7
62
42
8
0
49
1.34
2890--3203
62
5.0
62
75
12
338
32
16
10
39
1.84
2866--3239
187
2.0
188
97
0
705
32
15
10
40
1.82
3915--4059
70
2.1
70
88
0
209
50
0
12
37
1.40
7409--7448
2
21.0
2
90
10
66
52
0
0
47
1.00
7414--7455
12
3.3
12
90
6
57
52
0
2
45
1.13
7489--7514
2
13.0
2
100
0
52
50
0
0
50
1.00
13965--14024
30
2.0
30
87
6
86
33
5
28
33
1.79

Tables:   1

The End!