Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011306.1 Corchorus capsularis cultivar CVL-1 contig11327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47563

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7128--7160
17
1.9
17
93
0
57
36
15
3
45
1.61
8256--8280
13
1.9
13
100
0
50
44
0
0
56
0.99
12704--12743
2
20.0
2
89
0
62
50
5
0
45
1.23
12762--12786
2
12.5
2
100
0
50
52
0
0
48
1.00
19525--19578
27
2.0
28
85
10
76
42
3
5
48
1.44
22351--22392
18
2.3
18
87
0
57
33
11
26
28
1.92
32873--32898
10
2.6
10
100
0
52
50
19
7
23
1.73
36939--37142
111
1.8
111
91
0
336
34
24
20
20
1.96
37422--38509
488
2.2
491
87
3
1569
34
22
15
26
1.94
38515--38572
28
2.1
28
96
0
107
48
12
24
15
1.79
45306--45376
36
2.0
34
86
10
99
49
8
11
30
1.68
47198--47246
20
2.3
21
83
16
66
63
2
12
22
1.39
47207--47255
10
4.5
11
78
17
50
65
4
6
24
1.33

Tables:   1

The End!