Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011308.1 Corchorus capsularis cultivar CVL-1 contig11329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8131

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70--108
2
19.5
2
100
0
78
48
0
0
51
1.00
600--653
23
2.4
23
81
3
65
61
9
9
20
1.54
898--932
16
2.2
16
89
0
52
57
5
25
11
1.56
1151--1184
11
3.1
11
100
0
68
47
0
0
52
1.00
1810--1847
11
3.5
11
85
10
51
57
2
0
39
1.12
8043--8107
32
2.0
32
96
0
121
20
26
20
33
1.96

Tables:   1

The End!