Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011311.1 Corchorus capsularis cultivar CVL-1 contig11332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27001

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1545--1680
66
2.1
66
95
0
245
38
17
20
23
1.93
2286--2320
14
2.6
13
86
8
52
0
0
11
88
0.51
7640--7698
30
2.0
30
83
6
75
28
18
5
47
1.70
14018--14377
176
2.0
182
91
4
599
47
13
12
26
1.78
16284--16313
4
7.5
4
100
0
60
76
0
23
0
0.78
21968--22010
1
43.0
1
100
0
86
100
0
0
0
0.00

Tables:   1

The End!