Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011312.1 Corchorus capsularis cultivar CVL-1 contig11333, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9087

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--116
19
2.0
20
85
15
53
28
5
2
63
1.30
281--411
66
2.0
66
81
3
156
35
11
17
35
1.86
281--465
22
8.3
22
71
7
131
32
9
19
37
1.84
501--640
22
6.4
21
75
12
104
37
8
18
35
1.82
278--893
44
14.0
43
67
16
160
38
9
16
35
1.82
748--829
22
3.8
21
76
9
76
40
12
10
36
1.78
843--898
22
2.5
22
82
5
69
44
5
14
35
1.68
1021--1304
22
13.1
22
72
11
131
40
8
14
36
1.77
1045--1304
44
6.0
44
72
15
148
41
9
15
34
1.78
1372--1435
22
2.9
22
80
2
74
39
12
10
37
1.78
1461--1506
22
2.1
22
84
4
58
56
2
17
23
1.52
8613--8688
37
2.1
37
94
0
134
13
7
22
56
1.62

Tables:   1

The End!