Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011315.1 Corchorus capsularis cultivar CVL-1 contig11336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50141

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2365--2399
16
2.2
16
100
0
70
45
17
25
11
1.81
2444--2670
92
2.5
91
87
2
310
36
12
19
31
1.89
4961--5267
102
3.0
102
82
1
373
34
18
13
33
1.90
6417--6447
2
15.5
2
100
0
62
48
0
0
51
1.00
8372--8402
14
2.2
14
94
0
53
22
22
12
41
1.88
17443--17501
31
1.9
31
89
0
91
54
16
15
13
1.72
18470--18626
79
2.0
79
97
0
296
33
13
15
37
1.87
20716--20854
22
6.3
22
69
10
70
41
11
7
39
1.71
20798--20854
23
2.5
23
88
0
87
45
8
5
40
1.58
22638--22716
37
2.1
39
85
4
108
36
18
10
34
1.85
25089--25159
37
1.9
37
85
0
97
36
18
9
35
1.84
34779--34835
28
2.0
28
100
0
114
24
10
24
40
1.87
37850--37886
19
2.0
19
89
5
58
64
0
0
35
0.94
38186--38270
33
2.6
33
86
0
116
23
38
29
8
1.84
38186--38292
33
3.3
31
83
10
115
23
39
28
9
1.85
44743--44822
33
2.4
33
87
0
115
22
40
30
7
1.81

Tables:   1

The End!