Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011319.1 Corchorus capsularis cultivar CVL-1 contig11340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50771

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
951--1016
16
4.2
16
78
3
71
7
13
37
40
1.73
942--1016
31
2.4
32
90
2
116
8
14
37
40
1.76
1900--2065
22
7.5
22
71
3
100
38
9
15
37
1.79
1900--2009
44
2.5
44
82
4
123
40
6
15
38
1.73
6010--6137
43
2.9
44
77
5
125
36
8
14
40
1.76
5967--6137
22
7.8
22
73
12
129
37
9
15
37
1.80
21172--21207
2
19.0
2
88
11
58
52
0
0
47
1.00
23852--23889
20
1.9
20
94
0
67
18
15
39
26
1.91
28185--28287
30
3.5
28
74
15
84
19
12
27
40
1.87
28241--28418
53
3.4
53
91
3
272
19
15
28
37
1.92
39639--39665
6
4.5
6
100
0
54
55
14
0
29
1.40
40593--40617
10
2.5
10
100
0
50
24
8
20
48
1.76
49740--49841
30
3.4
29
77
12
109
17
12
29
40
1.87
49796--49978
53
3.4
53
85
10
237
19
14
27
38
1.91

Tables:   1

The End!