Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001133.1 Corchorus capsularis cultivar CVL-1 contig01133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11961

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--248
33
3.6
31
78
17
100
11
42
34
11
1.77
287--403
32
3.6
32
96
1
198
11
28
43
16
1.83
1640--1681
17
2.5
17
84
7
50
40
0
0
59
0.97
3061--3091
2
16.0
2
93
6
55
51
0
0
48
1.00
3432--3498
29
2.3
30
79
10
75
55
1
43
0
1.09
4007--4052
12
3.8
12
85
0
56
50
4
39
6
1.48
4001--4053
18
2.9
18
74
0
52
49
3
39
7
1.49
7727--7761
9
3.9
9
88
0
52
45
34
20
0
1.51
11421--11478
13
4.3
14
79
12
59
79
3
12
5
1.02
11413--11478
14
4.9
14
80
12
59
78
3
13
4
1.02
11420--11478
27
2.1
28
84
9
77
79
3
11
5
1.01

Tables:   1

The End!