Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011330.1 Corchorus capsularis cultivar CVL-1 contig11351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19605

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2723--2776
26
2.1
25
96
3
99
29
18
1
50
1.58
3609--3646
11
3.5
11
89
10
51
39
0
2
57
1.12
5750--5802
8
7.1
8
74
21
53
50
0
13
35
1.41
5750--5794
14
3.2
14
84
6
56
51
0
13
35
1.41
7243--7267
9
2.8
9
100
0
50
48
0
8
44
1.32
7637--7674
9
4.3
9
86
6
60
78
0
21
0
0.74
10404--10515
16
6.9
16
84
6
154
24
16
29
29
1.97
11594--11629
3
12.0
3
100
0
72
33
0
0
66
0.92
11650--11835
29
6.5
28
82
10
159
10
31
34
23
1.88
11676--11831
29
5.3
30
84
11
184
8
30
37
22
1.85
13582--13618
12
3.1
12
92
0
56
45
21
18
13
1.84
13744--13771
2
14.0
2
100
0
56
50
0
0
50
1.00
15152--15228
28
2.8
28
83
0
100
6
36
40
16
1.75

Tables:   1

The End!