Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011333.1 Corchorus capsularis cultivar CVL-1 contig11354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34244

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8493--8550
17
3.4
17
88
4
82
18
18
22
39
1.92
8727--8841
59
1.9
59
98
0
221
34
15
12
37
1.85
9780--9814
9
3.8
9
85
7
52
65
0
2
31
1.07
14842--14866
2
12.5
2
100
0
50
48
0
0
52
1.00
15582--15612
2
15.5
2
93
0
53
51
0
48
0
1.00
18251--18281
1
31.0
1
93
0
53
96
0
3
0
0.21
29257--29284
6
4.7
6
100
0
56
67
14
17
0
1.22
31137--31171
4
8.8
4
100
0
70
51
22
0
25
1.48
34213--34242
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!