Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011334.1 Corchorus capsularis cultivar CVL-1 contig11355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3012

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--684
9
4.3
9
86
0
60
41
2
10
46
1.51
654--691
18
2.1
18
100
0
76
36
5
10
47
1.61
642--709
27
2.5
27
83
4
84
41
8
8
41
1.67
2072--2550
30
15.7
30
86
3
584
34
17
16
31
1.92
2038--2550
61
8.4
61
86
4
583
34
17
16
30
1.93
2072--2550
91
5.2
90
85
4
575
34
17
16
31
1.92
2530--2641
45
2.5
45
100
0
224
35
17
14
32
1.90
2649--2886
118
2.0
118
97
0
449
23
18
20
37
1.94

Tables:   1

The End!