Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011337.1 Corchorus capsularis cultivar CVL-1 contig11358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10934

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6609--6965
156
2.3
155
79
4
389
34
19
15
30
1.93
8407--8736
35
9.3
35
74
10
166
37
18
7
36
1.78
8476--8790
52
5.9
52
79
10
244
38
17
6
37
1.76
8546--8591
21
2.2
21
92
0
74
43
17
2
36
1.61
8502--8808
73
4.3
73
81
6
383
38
17
6
37
1.75
8619--8664
21
2.2
21
92
0
74
43
17
2
36
1.61
8601--8788
87
2.1
89
89
3
281
38
17
7
37
1.77
8770--8808
21
1.9
21
84
5
53
41
12
0
46
1.42
8828--8945
38
3.1
38
88
0
155
25
11
5
56
1.57
10242--10281
21
1.9
21
85
10
55
15
25
10
50
1.74
10274--10318
14
3.1
15
81
6
58
22
15
6
55
1.63
10292--10541
22
11.2
21
72
15
148
16
21
6
56
1.63
10573--10625
22
2.4
22
87
0
70
22
20
1
54
1.54
10812--10855
22
1.9
24
86
9
65
29
20
6
43
1.78

Tables:   1

The End!