Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001134.1 Corchorus capsularis cultivar CVL-1 contig01134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3840

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
843--911
31
2.3
31
84
2
95
28
17
4
49
1.66
853--918
31
2.1
31
86
5
89
31
15
4
48
1.65
1409--1496
22
4.0
22
72
10
81
36
7
17
38
1.79
1658--1964
22
13.8
21
70
16
140
41
10
14
34
1.80
1735--1989
22
11.6
23
74
12
155
42
9
14
33
1.78
1773--1986
44
4.8
44
76
6
177
42
9
13
34
1.77
2070--2117
19
2.5
19
86
3
69
43
10
20
25
1.83
2108--2586
22
21.9
22
66
13
116
38
10
14
37
1.80
2235--2302
23
3.0
23
91
2
102
38
5
19
36
1.76
2239--2338
23
4.7
21
80
15
82
38
10
13
39
1.78
2221--2338
41
2.8
40
76
13
103
38
10
14
37
1.80
2477--2517
21
1.9
22
85
5
57
53
7
12
26
1.64
3797--3833
2
19.0
2
94
5
67
51
0
0
48
1.00

Tables:   1

The End!