Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011342.1 Corchorus capsularis cultivar CVL-1 contig11363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3259

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
782--878
22
4.5
22
76
20
80
20
18
7
53
1.68
794--1123
43
7.7
43
68
19
140
16
19
7
56
1.63
897--1173
22
13.2
21
69
17
116
18
19
7
54
1.66
1333--1376
22
1.9
24
86
9
65
29
20
6
43
1.78
1518--1542
13
1.9
13
100
0
50
24
20
16
40
1.91
1454--1636
56
3.0
61
87
10
245
26
18
8
46
1.76
2290--2479
51
3.8
49
76
8
193
36
16
4
42
1.69
2285--2477
102
1.9
100
89
2
296
36
16
5
41
1.71
2624--2652
10
2.7
11
94
5
51
31
27
0
41
1.56

Tables:   1

The End!