Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011354.1 Corchorus capsularis cultivar CVL-1 contig11375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33679

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8673--8743
29
2.4
29
93
4
117
39
8
1
50
1.41
10371--10450
39
2.1
39
100
0
160
17
12
17
52
1.74
16006--16050
22
2.0
22
87
8
65
48
6
2
42
1.41
18993--19030
19
2.1
18
90
5
58
13
7
21
57
1.60
19081--19379
149
2.0
149
99
0
589
36
11
25
26
1.90
19700--19764
26
2.5
26
94
0
112
33
15
18
32
1.92
23545--23625
40
2.0
40
97
0
153
46
20
7
24
1.76
23662--23691
15
2.0
15
100
0
60
46
20
6
26
1.75
23999--24035
9
3.8
10
83
16
51
62
2
35
0
1.10
24035--24087
23
2.3
24
83
9
74
26
7
28
37
1.83
24281--24367
29
2.9
30
79
5
104
36
14
18
29
1.91
29396--29459
29
2.1
31
91
5
105
48
4
18
28
1.68
29614--29677
33
2.0
33
90
3
103
39
31
10
18
1.86
32861--32900
21
1.9
21
89
0
62
45
10
7
37
1.66
32863--32927
21
3.0
21
81
2
58
41
6
7
44
1.58

Tables:   1

The End!