Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011356.1 Corchorus capsularis cultivar CVL-1 contig11377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19574

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6114--6158
19
2.3
19
92
3
72
31
4
20
44
1.71
14455--14486
16
2.1
15
94
5
55
31
3
18
46
1.65
15154--15188
17
2.1
17
100
0
70
42
0
11
45
1.40
16866--16910
6
7.5
6
89
0
63
11
15
0
73
1.10
17033--17089
30
1.9
29
96
3
105
52
12
10
24
1.70
17033--17102
30
2.6
26
88
11
97
51
10
12
25
1.71
19016--19078
2
35.5
2
73
23
61
52
0
1
46
1.10
19001--19074
31
2.5
30
87
8
107
55
0
1
43
1.08
19015--19085
19
3.5
19
79
13
72
52
0
1
46
1.09
19001--19078
28
2.7
29
81
14
97
55
0
1
43
1.08

Tables:   1

The End!