Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011360.1 Corchorus capsularis cultivar CVL-1 contig11381, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17137

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
607--643
15
2.3
17
86
9
51
8
16
0
75
1.02
1638--1783
42
3.5
42
88
0
202
45
11
15
27
1.81
1984--2609
137
4.6
136
85
8
812
31
9
21
38
1.85
6994--7139
42
3.5
42
88
0
211
45
10
15
27
1.80
7268--7899
137
4.6
136
86
5
808
32
10
20
37
1.86
10397--10451
13
4.4
13
80
15
62
60
7
1
30
1.35
13494--13530
18
2.1
18
94
0
65
18
29
10
40
1.85

Tables:   1

The End!