Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011366.1 Corchorus capsularis cultivar CVL-1 contig11387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12118

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4963--5048
45
1.9
44
83
2
109
24
45
20
9
1.81
10239--10300
25
2.3
26
81
8
63
22
19
6
51
1.69
10251--10315
28
2.4
28
78
2
69
21
20
6
52
1.68
10368--10499
36
3.6
36
88
2
192
16
21
3
58
1.52
10466--10513
22
2.2
21
85
10
62
16
22
0
60
1.36
10368--10526
73
2.2
72
83
6
189
17
22
3
57
1.54
10495--10607
35
3.2
34
73
5
109
23
18
5
52
1.66
10555--10597
21
2.1
20
86
4
59
20
20
4
53
1.63

Tables:   1

The End!