Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011368.1 Corchorus capsularis cultivar CVL-1 contig11389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5381

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2353--2414
25
2.3
26
83
8
72
22
17
6
53
1.67
2365--2429
28
2.4
28
78
2
69
21
20
6
52
1.68
2504--2621
7
16.1
7
70
16
55
18
22
2
55
1.54
2577--2624
22
2.2
21
89
10
71
18
22
0
58
1.39
2503--2610
36
3.0
36
91
1
171
19
23
2
54
1.57
2606--2718
35
3.2
34
75
5
118
23
18
5
53
1.65
2666--2708
21
2.1
20
86
4
59
20
20
4
53
1.63

Tables:   1

The End!