Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011372.1 Corchorus capsularis cultivar CVL-1 contig11393, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14115

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--70
20
3.5
20
77
4
84
60
2
23
13
1.47
29--121
46
2.0
47
87
6
136
54
2
25
17
1.54
20--84
20
3.3
19
72
12
60
56
1
27
13
1.46
10--95
39
2.2
39
91
0
136
54
2
26
16
1.54
89--200
35
3.2
35
81
7
122
53
3
26
16
1.59
91--215
35
3.6
34
79
8
117
53
4
24
18
1.61
254--305
21
2.5
20
82
14
61
51
7
15
25
1.69
8422--8450
11
2.6
11
100
0
58
17
20
20
41
1.90

Tables:   1

The End!