Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011374.1 Corchorus capsularis cultivar CVL-1 contig11395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7726

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
429--472
22
2.0
22
95
0
79
29
0
34
36
1.58
1146--1178
15
2.3
15
90
10
52
48
6
3
42
1.43
3151--3189
17
2.3
17
95
0
69
35
23
0
41
1.55
4684--4794
56
2.0
55
89
8
172
45
9
6
38
1.63
5105--5154
16
3.1
15
78
13
55
34
0
2
64
1.05
7014--7039
6
4.3
6
100
0
52
50
34
0
15
1.45
7171--7376
44
4.6
44
78
10
159
33
10
18
37
1.85
7169--7322
66
2.3
65
83
6
177
35
11
16
35
1.86
7172--7369
22
8.9
22
78
11
129
34
10
17
36
1.85
7422--7546
22
5.6
22
72
11
76
35
10
20
34
1.86
7497--7710
22
9.5
22
69
21
81
40
9
14
35
1.78
7631--7669
21
2.0
19
85
14
53
46
5
5
43
1.48

Tables:   1

The End!