Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011376.1 Corchorus capsularis cultivar CVL-1 contig11397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13789

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2823--2857
18
1.9
18
94
0
61
48
31
14
5
1.67
2944--3042
35
2.8
35
85
0
135
25
24
23
27
2.00
3096--3130
17
2.1
17
100
0
70
22
40
31
5
1.78
4203--4305
52
2.0
52
90
0
161
24
25
22
28
1.99
7825--7976
36
4.2
37
90
2
202
28
19
9
42
1.82
7968--8160
74
2.7
68
80
14
219
24
26
10
38
1.88
8019--8173
74
2.1
74
91
0
247
24
27
8
40
1.84
7994--8175
37
5.1
37
83
3
223
23
29
8
38
1.85
8166--8244
36
2.2
36
84
4
97
24
13
12
49
1.77
8317--8379
30
2.1
31
96
3
119
19
22
12
46
1.83
8762--8802
18
2.5
17
88
11
59
4
34
0
60
1.18
11124--11190
19
3.6
18
80
6
71
40
28
13
17
1.88
11267--11305
18
2.2
18
90
0
60
30
15
2
51
1.57
11358--11395
15
2.6
15
91
4
60
57
0
23
18
1.40
13120--13153
16
2.2
16
89
5
52
61
8
0
29
1.26

Tables:   1

The End!