Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011388.1 Corchorus capsularis cultivar CVL-1 contig11409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3358

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--715
38
5.2
38
95
0
324
49
6
18
25
1.71
518--780
76
3.5
76
86
5
331
49
6
18
26
1.71
518--799
114
2.5
112
82
8
302
49
6
18
25
1.71
788--874
32
2.7
32
89
7
122
56
4
18
20
1.59
1121--1155
14
2.5
14
90
0
61
57
5
17
20
1.60
1245--1302
26
2.3
26
82
8
75
43
3
27
25
1.71
1351--1380
15
2.0
15
93
0
51
63
0
16
20
1.31
1351--1396
24
1.9
24
90
0
74
60
2
19
17
1.46

Tables:   1

The End!