Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011392.1 Corchorus capsularis cultivar CVL-1 contig11413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9557

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
717--941
38
6.0
38
83
7
264
48
7
18
25
1.73
707--965
114
2.3
113
79
9
269
48
6
19
24
1.73
949--1035
32
2.7
32
90
3
129
55
4
19
20
1.61
1257--1292
14
2.6
14
95
0
63
55
5
19
19
1.62
1383--1440
26
2.3
25
79
8
64
41
5
27
25
1.76
1489--1518
15
2.0
15
93
0
51
63
0
16
20
1.31
1489--1534
24
1.9
24
90
0
74
60
2
19
17
1.46

Tables:   1

The End!