Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011394.1 Corchorus capsularis cultivar CVL-1 contig11415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34694

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11020--11096
36
2.1
36
90
0
118
36
12
24
25
1.92
12502--12558
21
2.7
21
91
0
96
17
7
26
49
1.72
13505--13539
2
17.5
2
100
0
70
48
0
0
51
1.00
15118--15209
46
2.0
46
87
4
132
46
26
8
18
1.78
17071--17112
21
2.0
21
100
0
84
38
33
0
28
1.58
19836--19879
3
14.7
3
100
0
88
68
0
0
31
0.90
20393--20495
51
2.0
51
96
0
188
26
8
24
40
1.84
21628--21652
2
12.5
2
100
0
50
48
0
0
52
1.00
25477--25518
18
2.3
18
95
0
75
28
14
9
47
1.75
25551--25616
32
2.1
32
100
0
132
39
16
15
28
1.89
31220--31261
20
2.1
20
86
0
57
14
23
19
42
1.87
33680--33714
16
2.2
16
89
0
52
8
17
40
34
1.80

Tables:   1

The End!