Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011399.1 Corchorus capsularis cultivar CVL-1 contig11420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54622

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29259--29305
17
2.6
18
86
10
60
2
14
2
80
0.89
30289--30316
14
2.0
14
100
0
56
0
7
0
92
0.37
33182--33218
19
1.9
19
94
0
65
16
29
13
40
1.86
39966--40010
23
2.0
23
90
0
72
11
11
11
66
1.45
51744--51780
19
1.9
19
88
0
56
45
10
8
35
1.69
52702--54557
332
5.6
331
84
6
2213
37
15
14
33
1.88

Tables:   1

The End!