Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000114.1 Corchorus capsularis cultivar CVL-1 contig00114, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8906

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3436--4101
22
30.4
21
67
17
111
37
12
17
33
1.87
3436--3552
45
2.6
43
82
4
117
36
14
15
33
1.88
3436--4004
22
26.1
21
68
12
134
37
12
17
32
1.87
4045--4101
24
2.5
22
81
10
69
35
14
12
38
1.83
4126--4236
22
5.0
22
70
10
75
38
9
16
35
1.82
4128--4236
44
2.5
43
80
8
112
39
10
14
35
1.80
4287--4422
22
6.2
22
73
13
118
37
11
19
30
1.88
4285--4415
66
2.0
66
80
8
151
38
12
17
32
1.87
4304--4426
44
2.8
44
82
4
149
39
11
18
30
1.86
4363--4434
22
3.3
21
73
7
63
38
12
15
33
1.85
4340--4460
44
2.8
44
82
2
118
38
12
14
33
1.84
4829--4983
76
2.0
77
97
1
294
41
12
8
37
1.74

Tables:   1

The End!