Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011402.1 Corchorus capsularis cultivar CVL-1 contig11423, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41472

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3660--3766
29
3.6
29
80
3
115
17
29
14
37
1.90
3787--3858
29
2.4
30
81
9
94
36
18
27
18
1.94
20096--20128
17
1.9
18
88
11
52
66
21
9
3
1.33
31503--31538
7
5.1
7
100
0
72
55
0
44
0
0.99
39975--40022
24
2.0
24
100
0
96
37
0
25
37
1.56
40228--40265
2
19.0
2
88
0
58
55
0
0
44
0.99
40227--40265
10
3.9
10
96
0
69
56
0
0
43
0.99
41432--41470
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!