Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011403.1 Corchorus capsularis cultivar CVL-1 contig11424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29277

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8649--8961
171
1.8
171
97
0
599
28
21
18
31
1.97
8822--9228
140
2.9
144
89
7
590
29
21
18
30
1.97
9866--10133
47
5.8
46
68
15
171
38
13
9
37
1.78
9938--10143
89
2.3
87
86
8
292
38
13
9
38
1.77
10126--10179
27
2.0
26
85
3
72
33
14
12
38
1.85
10075--10234
74
2.1
75
91
4
261
38
14
10
37
1.80
11422--11451
14
2.1
14
93
0
51
86
3
10
0
0.67
16139--16167
7
4.1
7
100
0
58
86
0
13
0
0.58
24892--24922
2
15.5
2
100
0
62
48
0
0
51
1.00
26370--26450
24
3.2
24
83
10
117
34
14
32
18
1.91
26384--26459
24
2.9
27
82
11
113
35
15
27
21
1.94
26535--26589
27
2.0
27
92
0
92
30
30
23
14
1.94
28243--28312
29
2.4
29
85
2
86
38
28
12
20
1.89

Tables:   1

The End!