Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011404.1 Corchorus capsularis cultivar CVL-1 contig11425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34654

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5663--5703
3
13.7
3
94
0
73
0
31
2
65
1.05
12608--12654
24
1.9
25
95
4
87
27
10
10
51
1.70
12678--12732
27
2.0
27
100
0
110
60
3
21
14
1.50
28824--28850
4
6.8
4
100
0
54
22
0
0
77
0.76
32536--32573
2
18.5
2
94
5
67
50
0
2
47
1.15
34614--34654
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!