Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011408.1 Corchorus capsularis cultivar CVL-1 contig11429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38208

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
229--262
2
17.5
2
93
6
61
50
0
0
50
1.00
6282--6315
18
1.9
18
88
5
52
44
17
5
32
1.73
9256--9280
2
12.5
2
100
0
50
48
0
0
52
1.00
14031--14075
23
2.0
23
86
8
65
77
2
0
20
0.87
14038--14075
16
2.3
17
95
4
69
78
0
0
21
0.74
15735--15780
23
2.0
24
86
4
67
30
15
8
45
1.76
15902--15992
44
2.1
44
100
0
182
41
10
6
40
1.66
20457--20496
16
2.4
17
91
4
64
52
0
0
47
1.00
20459--20496
18
2.1
18
95
0
67
55
0
0
44
0.99
21205--21264
31
1.9
31
86
0
84
31
15
25
28
1.95
26124--26149
6
4.3
6
100
0
52
46
19
34
0
1.50
35841--35873
2
16.5
2
87
12
50
48
0
3
48
1.17
36641--36682
21
2.0
21
85
0
57
14
21
11
52
1.73
36752--36793
21
2.0
21
100
0
84
23
38
14
23
1.92

Tables:   1

The End!