Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011411.1 Corchorus capsularis cultivar CVL-1 contig11432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11128

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6538--6601
31
2.0
32
84
3
85
29
15
4
50
1.65
6838--6967
22
5.9
21
74
8
80
33
11
16
38
1.84
6935--6989
22
2.4
22
78
6
56
30
7
20
41
1.79
7032--7420
22
17.7
21
70
16
134
38
9
16
34
1.81
7192--7329
68
2.1
64
81
12
156
41
9
14
34
1.78
7526--8082
22
25.6
22
69
12
163
40
10
14
34
1.81
7714--7798
23
3.8
22
82
4
107
37
8
15
38
1.77
9579--9625
22
2.1
22
96
0
85
42
4
6
46
1.48
9579--9621
11
3.9
11
90
0
68
41
4
6
46
1.51
9760--9801
2
21.0
2
90
9
68
47
0
2
50
1.14
9760--9802
17
2.5
17
96
0
77
46
0
2
51
1.13

Tables:   1

The End!