Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011413.1 Corchorus capsularis cultivar CVL-1 contig11434, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72221

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7019--7103
33
2.5
34
86
7
111
55
12
8
23
1.64
9255--9303
7
6.6
7
77
13
53
83
2
2
12
0.82
9257--9304
24
2.0
24
91
0
78
81
2
2
14
0.88
9255--9304
19
2.6
20
82
14
61
82
2
2
14
0.86
21022--21046
13
1.9
13
100
0
50
64
0
0
36
0.94
25638--25676
18
2.2
18
86
9
53
61
0
30
7
1.24
27796--27838
21
2.0
22
81
9
52
27
9
11
51
1.69
29515--29606
44
2.1
44
100
0
184
39
10
4
45
1.59
32728--32960
49
4.7
49
81
9
283
48
0
1
49
1.14
32727--32911
2
99.5
2
69
14
74
47
0
1
50
1.12
34308--34340
7
5.0
7
92
7
52
0
15
0
84
0.61
34312--34340
13
2.3
13
94
5
51
0
13
0
86
0.58
42177--42473
73
4.0
73
92
1
495
37
23
8
30
1.85
42177--42473
148
2.0
146
93
1
504
37
23
8
30
1.85
45487--45556
34
2.1
34
100
0
140
31
5
27
35
1.80
47399--47475
2
43.5
2
70
23
57
51
1
0
46
1.09
47398--47479
23
3.7
21
79
8
83
52
1
0
46
1.08
47424--47477
19
2.7
19
81
15
65
53
1
0
44
1.11
47398--47477
9
8.3
10
72
20
64
52
1
0
46
1.08
47412--47470
31
1.9
30
93
3
100
50
1
0
47
1.11
49735--49773
20
1.9
21
94
5
71
33
25
17
23
1.96
69246--70280
228
4.5
227
85
1
1189
18
23
28
29
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69247--70280
456
2.3
456
84
2
1335
18
23
28
29
1.98
72175--72215
2
21.5
2
90
9
68
51
0
0
48
1.00

Tables:   1

The End!